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Signaling Pathways and Reaction Networks


Find your antibody (and more protein related research products) by viewing signaling pathways and reaction pathways. 1. Metabolism 1.1 Carbohydrate Metabolism Glycolysis / Gluconeogenesis Citrate cycle (TCA cycle) Pentose phosphate pathway Pentose and glucuronate interconversions Fructose and mannose metabolism Galactose metabolism Ascorbate and aldarate metabolism Starch and sucrose metabolism Amino sugar and nucleotide sugar metabolism Pyruvate metabolism Glyoxylate and dicarboxylate metabolism Propanoate metabolism Butanoate metabolism C5-Branched dibasic acid metabolism Inositol phosphate metabolism Enzymes 1.2 Energy Metabolism Oxidative phosphorylation Photosynthesis Photosynthesis - antenna proteins Carbon fixation in photosynthetic organisms Carbon fixation pathways in prokaryotes Methane metabolism Nitrogen metabolism Sulfur metabolism 1.3 Lipid Metabolism Fatty acid biosynthesis Fatty acid elongation Fatty acid metabolism Synthesis and degradation of ketone bodies Cutin, suberine and wax biosynthesis Steroid biosynthesis Primary bile acid biosynthesis Secondary bile acid biosynthesis Steroid hormone biosynthesis Glycerolipid metabolism Glycerophospholipid metabolism Ether lipid metabolism Sphingolipid metabolism Arachidonic acid metabolism Linoleic acid metabolism alpha-Linolenic acid metabolism Biosynthesis of unsaturated fatty acids 1.4 Nucleotide Metabolism Purine metabolism Pyrimidine metabolism 1.5 Amino Acid Metabolism Alanine, aspartate and glutamate metabolism Glycine, serine and threonine metabolism Cysteine and methionine metabolism Valine, leucine and isoleucine degradation Valine, leucine and isoleucine biosynthesis Lysine biosynthesis Lysine degradation Arginine and proline metabolism Histidine metabolism Tyrosine metabolism Phenylalanine metabolism Tryptophan metabolism Phenylalanine, tyrosine and tryptophan biosynthesis 1.6 Metabolism of Other Amino Acids beta-Alanine metabolism Taurine and hypotaurine metabolism Phosphonate and phosphinate metabolism Selenocompound metabolism Cyanoamino acid metabolism D-Glutamine and D-glutamate metabolism D-Arginine and D-ornithine metabolism D-Alanine metabolism Glutathione metabolism 1.7 Glycan Biosynthesis and Metabolism N-Glycan biosynthesis Various types of N-glycan biosynthesis Mucin type O-Glycan biosynthesis Other types of O-glycan biosynthesis Glycosaminoglycan biosynthesis - chondroitin sulfate Glycosaminoglycan biosynthesis - heparan sulfate Glycosaminoglycan biosynthesis - keratan sulfate Glycosaminoglycan degradation Glycosylphosphatidylinositol(GPI)-anchor biosynthesis Glycosphingolipid biosynthesis - lacto and neolacto series Glycosphingolipid biosynthesis - globo series Glycosphingolipid biosynthesis - ganglio series Lipopolysaccharide biosynthesis Peptidoglycan biosynthesis Other glycan degradation 1.8 Metabolism of Cofactors and Vitamins Thiamine metabolism Riboflavin metabolism Vitamin B6 metabolism Nicotinate and nicotinamide metabolism Pantothenate and CoA biosynthesis Biotin metabolism Lipoic acid metabolism Folate biosynthesis One carbon pool by folate Retinol metabolism Porphyrin and chlorophyll metabolism Ubiquinone and other terpenoid-quinone biosynthesis 1.9 Metabolism of Terpenoids and Polyketides Terpenoid backbone biosynthesis Monoterpenoid biosynthesis Sesquiterpenoid and triterpenoid biosynthesis Diterpenoid biosynthesis Carotenoid biosynthesis Brassinosteroid biosynthesis Insect hormone biosynthesis Zeatin biosynthesis Limonene and pinene degradation Geraniol degradation Type I polyketide structures Biosynthesis of 12-, 14- and 16-membered macrolides Biosynthesis of ansamycins Biosynthesis of type II polyketide backbone Biosynthesis of type II polyketide products Tetracycline biosynthesis Polyketide sugar unit biosynthesis Nonribosomal peptide structures Biosynthesis of siderophore group nonribosomal peptides Biosynthesis of vancomycin group antibiotics 1.10 Biosynthesis of Other Secondary Metabolites Phenylpropanoid biosynthesis Stilbenoid, diarylheptanoid and gingerol biosynthesis Flavonoid biosynthesis Flavone and flavonol biosynthesis Anthocyanin biosynthesis Isoflavonoid biosynthesis Indole alkaloid biosynthesis Isoquinoline alkaloid biosynthesis Tropane, piperidine and pyridine alkaloid biosynthesis Acridone alkaloid biosynthesis Caffeine metabolism Betalain biosynthesis Glucosinolate biosynthesis Benzoxazinoid biosynthesis Penicillin and cephalosporin biosynthesis beta-Lactam resistance Streptomycin biosynthesis Butirosin and neomycin biosynthesis Clavulanic acid biosynthesis Puromycin biosynthesis Novobiocin biosynthesis 1.11 Xenobiotics Biodegradation and Metabolism Benzoate degradation Aminobenzoate degradation Fluorobenzoate degradation Chloroalkane and chloroalkene degradation Chlorocyclohexane and chlorobenzene degradation Toluene degradation Xylene degradation Nitrotoluene degradation Ethylbenzene degradation Styrene degradation Atrazine degradation Caprolactam degradation DDT degradation Bisphenol degradation Dioxin degradation Naphthalene degradation Polycyclic aromatic hydrocarbon degradation Metabolism of xenobiotics by cytochrome P450 Drug metabolism - cytochrome P450 Drug metabolism - other enzymes 1.12 Overview Overview of biosynthetic pathways Biosynthesis of plant secondary metabolites Biosynthesis of phenylpropanoids Biosynthesis of terpenoids and steroids Biosynthesis of alkaloids derived from shikimate pathway Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid Biosynthesis of alkaloids derived from histidine and purine Biosynthesis of alkaloids derived from terpenoid and polyketide Biosynthesis of plant hormones 2. Genetic Information Processing 2.1 Transcription RNA polymerase Basal transcription factors Spliceosome 2.2 Translation Ribosome Aminoacyl-tRNA biosynthesis RNA transport mRNA surveillance pathway Ribosome biogenesis in eukaryotes Protein processing in endoplasmic reticulum SNARE interactions in vesicular transport Ubiquitin mediated proteolysis Sulfur relay system Proteasome RNA degradation 2.4 Replication and Repair DNA replication Base excision repair Nucleotide excision repair Mismatch repair Homologous recombination Non-homologous end-joining Fanconi anemia pathway 3. Environmental Information Processing 3.1 Membrane Transport ABC transporters Phosphotransferase system (PTS) Bacterial secretion system 3.2 Signal Transduction Two-component system MAPK signaling pathway MAPK signaling pathway - fly MAPK signaling pathway - yeast ErbB signaling pathway Wnt signaling pathway Notch signaling pathway Hedgehog signaling pathway TGF-beta signaling pathway VEGF signaling pathway Jak-STAT signaling pathway Calcium signaling pathway Phosphatidylinositol signaling system mTOR signaling pathway Plant hormone signal transduction 3.3 Signaling Molecules and Interaction Neuroactive ligand-receptor interaction Cytokine-cytokine receptor interaction ECM-receptor interaction Cell adhesion molecules (CAMs) 4. Cellular Processes 4.1 Transport and Catabolism Endocytosis Phagosome Lysosome Peroxisome Regulation of autophagy 4.2 Cell Motility Bacterial chemotaxis Flagellar assembly Regulation of actin cytoskeleton 4.3 Cell Growth and Death Cell cycle Cell cycle - yeast Cell cycle - Caulobacter Meiosis - yeast Oocyte meiosis Apoptosis p53 signaling pathway 4.4 Cell Communication Focal adhesion Adherens junction Tight junction Gap junction 5. Organismal Systems 5.1 Immune System Hematopoietic cell lineage Complement and coagulation cascades Toll-like receptor signaling pathway NOD-like receptor signaling pathway RIG-I-like receptor signaling pathway Cytosolic DNA-sensing pathway Natural killer cell mediated cytotoxicity Antigen processing and presentation T cell receptor signaling pathway B cell receptor signaling pathway Fc epsilon RI signaling pathway Fc gamma R-mediated phagocytosis Leukocyte transendothelial migration Intestinal immune network for IgA production Chemokine signaling pathway 5.2 Endocrine System Insulin signaling pathway Adipocytokine signaling pathway PPAR signaling pathway GnRH signaling pathway Progesterone-mediated oocyte maturation Melanogenesis Renin-angiotensin system 5.3 Circulatory System Cardiac muscle contraction Vascular smooth muscle contraction 5.4 Digestive System Salivary secretion Gastric acid secretion Pancreatic secretion Bile secretion Carbohydrate digestion and absorption Protein digestion and absorption Fat digestion and absorption Vitamin digestion and absorption Mineral absorption 5.5 Excretory System Vasopressin-regulated water reabsorption Aldosterone-regulated sodium reabsorption Endocrine and other factor-regulated calcium reabsorption Proximal tubule bicarbonate reclamation Collecting duct acid secretion 5.6 Nervous System Glutamatergic synapse GABAergic synapse Cholinergic synapse Dopaminergic synapse New! Serotonergic synapse New! Long-term potentiation Long-term depression Retrograde endocannabinoid signaling New! Synaptic vesicle cycle Neurotrophin signaling pathway 5.7 Sensory System Phototransduction Phototransduction - fly Olfactory transduction Taste transduction 5.8 Development Dorso-ventral axis formation Axon guidance Osteoclast differentiation 5.9 Environmental Adaptation Circadian rhythm - mammal Circadian rhythm - fly Circadian rhythm - plant Plant-pathogen interaction Signaling Pathways and Reaction Networks

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